BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B04SP1|AL430000
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig845 1528 0.0
>3x_Contig845
Length = 3389
Score = 1528 bits (759), Expect = 0.0
Identities = 845/883 (95%), Gaps = 3/883 (0%)
Strand = Plus / Minus
Query: 1 catttcgwacgaatgcagcagatccgagtgttcattccgtaaaccagaaattgattgatg 60
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2274 catttcgtacgaatgctgcagatccgagtgttcattccgtaaaccagaaattgattgatg 2215
Query: 61 cagctcatgaacgttagtktcgaattgattgwtgwtgcwgmagtwgwtgtwgatgttgat 120
|||||||||||||||||| |||| ||||||| || ||| | || | ||| |||||||||
Sbjct: 2214 cagctcatgaacgttagtgtcga-ttgattgttgttgctgctgttgttgttgatgttgat 2156
Query: 121 gttgttgmtgtagtagctgtatgtttwaaatatgatgttggggtgaattgtaatagtcca 180
||||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2155 gttgttgctgttgttgctgtttgtttttaatatgatgttggggtgaattgtaatagtcca 2096
Query: 181 cggaaggcactaaattaacagggtaatttgcacctgttggatacaaggcaaggccgtact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2095 cggaaggcactaaattaacagggtaatttgcacctgttggatacaaggcaaggccgtcct 2036
Query: 241 gagtattgtataatgggttgggcatgatgtgcgccgcatcgtgggatgtatatgagtgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 gagtattgtataatgggttgggcatgatgtgcgccgcatcgtgggatgtatatgagtgcg 1976
Query: 301 atctatttggcgggggaaattcattccaactagcagaatcctgggatccagatcctagaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1975 atctatttggcgggggaaattcattccaactagcagaatcctgggatccagatcct-gaa 1917
Query: 361 aaaragaaagmtaaaartgcactatwtttcctgttatttgacatatggtatttggaggac 420
||| | | | | |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1916 aaagtggacgctgttggtgcactgtttttcctgttatttgacatatggtatttggaggac 1857
Query: 421 cctctcttgatggatttcaacgattctgtgtcacctttccggaagtaaccggacgaatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1856 cctctcttgatggatttcaacgattctgtgtcacctttccggaagtaaccggacgaatgc 1797
Query: 481 ttgaactcccataaattaattgatggttcatctgaatcatcggtgtttgcggcccaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 ttgaactcccataaattaattgatggttcatctgaatcatcggtgtttgcggcccaagtt 1737
Query: 541 gatttatggtcgctaactttctgaaatccgtacatattcaactgtctaacaaacgaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1736 gatttatggtcgctaactttctgaaatccgtacatattcaactgtctaacaaacgaagca 1677
Query: 601 acgtttgtatgcttgaaaaaggcagaaagtgctttcgaaaatcgttctgtcggtcttatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1676 acgtttgtatgcttgaaaaaggcagaaagtgctttcgaaaatcgttctgtcggtcttatc 1617
Query: 661 aaaaacgaatcacaagaaggtgammammaaataaggttcttcaaatcatcatcttcaagc 720
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1616 aaaaacgaatcacaagaaggtgaccaccaaataaggttcttcaaatcatcatcttcaagc 1557
Query: 721 atgctgtaaagtttatgaataaaatgcggattttgcggggtagatgaattctggaccgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 atgctgtaaagtttatgaataaaatgcggattttgcggggtagatgaattctggaccgtg 1497
Query: 781 ggctgtacmtcagatttcacatttgaagtaccttctgtagcattggaa-cattgctttta 839
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1496 ggctgtacctcagatttcacatttgaagtaccttctgtagcattggaaccattgctttta 1437
Query: 840 tcatcttttttctcttgaccagacttctcaggttgttcctttc 882
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 tcatcttttttctcttgaccagacttctcaggttgttcctttc 1394
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5693
Number of Sequences: 1807
Number of extensions: 5693
Number of successful extensions: 136
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)